rs17664519 chr2:70975419 A>G
- Sequence
tgctgtctgcccttctcatggtcc[A/G]gcttctgttgttccaccaggcgtt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HTF4_HUMAN MTG16_HUMAN TAL1_HUMAN MTG8R_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | n/a | 2.67 | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | n/a | 2.43 | 2.00 | n/a | n/a | |||
| TAL1_HUMAN | -0.57 | 2.19 | 2.00 | n/a | No Hit | |||
| MTG8R_HUMAN | -2.82 | 2.20 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP asthma, hdl cholesterol, maternal transmission distortion, neuroblastoma (brain cancer), transmission distortion