rs17674528 chr19:3626773 A>G
- Sequence
gtgtcccgacccatcggctgggcc[A/G]gtggccgcggcaccaacaccaata
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells) HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXK2_HUMAN ZN629_HUMAN ESR1_HUMAN HDAC1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.85 | 1.08 | 1.67 | n/a | n/a | |||
| ZN629_HUMAN | 2.56 | n/a | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 1.17 | n/a | 2.25 | n/a | No Hit | |||
| HDAC1_HUMAN | 0.42 | 1.62 | 2.00 | n/a | n/a |
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