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rs17677254 chr2:75565704 A>G

Sequence
agtagtaaatgatctccaggagtg[A/G]tggagcaaggcaggcatgtaaagc
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CEBPA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPA_HUMAN 2.14 -1.62 0.021.00 2.00 0.34 Weak Discordant
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Motif analysis

CEBPA_HUMAN Weak Discordant
CEBPA_HUMAN pic

Genetic associations

GRASP fasting blood glucose hdl cholesterol change with statins ldl cholesterol ldl cholesterol change with statins total cholesterol change with statins
GTEx eQTL Artery_Coronary Cells_Cultured_fibroblasts Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Thyroid

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