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rs17683569 chr19:18603440 G>T

Sequence
tgccaaggtcctggggcagaagcg[G/T]tgggaaatgaggtttgagaggtca
ASB in cell types
cranial neural crest cells
ASB for transcription factors
COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN 2.71 n/a 1.1·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Coronary Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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