rs17690015 chr17:69466658 G>A
- Sequence
tccctgtgaatgccgggaaatccc[G/A]tggcattttcttacagaaacaggt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ZN143_HUMAN GRHL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN143_HUMAN | -1.74 | 2.37 | 1.33 | -2.21 | Discordant | |||
| GRHL2_HUMAN | -0.51 | 1.31 | 1.47 | n/a | No Hit |
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Motif analysis
