rs177552 chr11:16909861 T>C
- Sequence
ataaagtgtcatggtttcactttt[T/C]ataatagatctgacagcccttcgg
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- PKNX1_HUMAN SRF_HUMAN IKZF1_HUMAN MTA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -2.03 | 1.85 | 1.33 | n/a | No Hit | |||
| SRF_HUMAN | -1.87 | 2.10 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.04 | 1.50 | 1.33 | n/a | No Hit | |||
| MTA2_HUMAN | -1.97 | 2.02 | 1.33 | n/a | n/a | |||
| FOXK2_HUMAN | n/a | 1.79 | 1.33 | n/a | n/a |
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