rs17768950 chr2:46657138 C>G
- Sequence
gtgaaactgtgcccagttattgat[C/G]tagagattgaccaccagaggcagt
- ASB in cell types
- esophagus squamous epithelium CD34+ stem cells-derived erythroblasts hepatocytes
- ASB for transcription factors
- CTCF_HUMAN CUX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.60 | 0.73 | 1.38 | n/a | No Hit | |||
| CUX1_HUMAN | 2.03 | -2.27 | 1.33 | 1.31 | Weak Discordant |
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Motif analysis
