rs1779228 chr10:18185798 T>C
- Sequence
taaatatttattctgtgcctacca[T/C]gtgccagaaactgttctcggtgct
- ASB in cell types
- breast tumor tissue
- ASB for transcription factors
- ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | n/a | 2.14 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, diastolic blood pressure (dbp), hdl cholesterol, homovanillic acid (hva) in cerebrospinal fluid (csf), hypertension (early onset hypertension), ldl cholesterol, longstanding arthritis, systolic blood pressure (sbp), tetrology of fallot
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic