rs1780595 chr1:15245117 G>A
- Sequence
gagtgagaactcatgcaccctaca[G/A]gaacagcaccaagccatccatgag
- ASB in cell types
- GM12878 (female B-cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- MITF_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MITF_HUMAN | 1.74 | -1.47 | 1.00 | n/a | No Hit | |||
| BHE40_HUMAN | -1.45 | 1.69 | 1.33 | n/a | No Hit |
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