rs1781053 chr1:108016900 G>A
- Sequence
cacactgtcaacaggggctacaca[G/A]ggcaaactctgttttgtggtgggg
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | -0.30 | 0.63 | 2.00 | |||
| K562 (myelogenous leukemia) | 0.38 | 0.57 | 1.35 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cortex, Brain_Hippocampus, Lung, Whole_Blood