rs178873 chr17:31457413 G>A
- Sequence
ctctccccaggggtccccagttcc[G/A]gccatgccctgtgtcctctccttc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HDAC1_HUMAN COT1_HUMAN MGAP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | 1.59 | -1.11 | 2.00 | n/a | n/a | |||
| COT1_HUMAN | 2.21 | -3.26 | 2.00 | n/a | No Hit | |||
| MGAP_HUMAN | 2.14 | -1.97 | 2.00 | n/a | n/a |
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