rs179744 chr14:31027006 T>C
- Sequence
ctgtggttactgattcctcgtctc[T/C]gtcttgagcctgggctttggtccc
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells) HEK293T (embryonic kidney)
- ASB for transcription factors
- TYY1_HUMAN CLOCK_HUMAN PRDM4_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.95 | n/a | 1.50 | 3.88 | Discordant | |||
| CLOCK_HUMAN | 1.97 | -1.62 | 1.50 | n/a | No Hit | |||
| PRDM4_HUMAN | 1.89 | -2.13 | 1.33 | n/a | n/a |
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Motif analysis
