rs179871 chr7:106378048 A>G
- Sequence
ttggaggttggctgactgtgtggg[A/G]tgtagtcccttcctcagggtgctc
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN JUN_HUMAN EP300_HUMAN MAFK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.07 | 2.33 | 1.83 | n/a | No Hit | |||
| JUN_HUMAN | -1.40 | 2.00 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | -3.45 | 2.45 | 2.00 | n/a | n/a | |||
| MAFK_HUMAN | -2.87 | 2.30 | 2.00 | n/a | No Hit |
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