ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs179873
chr7:106378103
T
>
C
Sequence
tgtggtttggcctacactgctctc[T/C]ggaactcctctgctcagactcccg
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
EP300_HUMAN
GCR_HUMAN
MAFK_HUMAN
JUN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN
n/a
2.71
1.00
8.0·10
-9
2.00
n/a
n/a
GCR_HUMAN
-1.90
2.52
1.00
1.3·10
-7
2.00
n/a
No Hit
MAFK_HUMAN
n/a
2.51
1.00
7.7·10
-4
2.00
n/a
No Hit
JUN_HUMAN
-1.88
1.72
1.00
3.8·10
-3
2.00
n/a
No Hit
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
college completion
,
serum creatinine
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)