rs1799873 chr17:40820746 G>A
- Sequence
tgggcagagactatttaaaaagca[G/A]ctacatagttgatctcatgtaatg
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.87 | -0.24 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, ldl cholesterol change with statins, parkinsons disease, refractive error, rheumatoid arthritis, total cholesterol, total cholesterol change with statins
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Liver, Lung, Minor_Salivary_Gland, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Stomach, Thyroid, Uterus