rs180390 chr5:69047988 A>T
- Sequence
tctcaaaagtttccactcaaatcg[A/T]gttgtgataaaaacagaagtgtga
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.80 | 1.38 | 1.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, college completion, fasting blood glucose, hdl cholesterol, ldl cholesterol change with statins, total cholesterol change with statins