rs1808574 chr11:44556737 A>G
- Sequence
acctcaggtgatctgcccgcctca[A/G]cctcgcaaaatgctggggttacag
- ASB in cell types
- bipolar neuron neural progenitors neural cell HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.90 | 0.47 | 1.33 | n/a | No Hit | |||
| SMC3_HUMAN | 1.12 | -1.03 | 1.00 | n/a | n/a |
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