rs1808693 chr17:67491364 A>G
- Sequence
caatgccgggccgttcattaagaa[A/G]tgctttctgggtcatctgggtgca
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) SK-N-SH (neuroblastoma) SUM159PT (pleiomorphic breast carcinoma)
- ASB for transcription factors
- JUN_HUMAN CEBPB_HUMAN GCR_HUMAN EP300_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.66 | 0.85 | 2.54 | n/a | No Hit | |||
| CEBPB_HUMAN | 1.42 | -0.85 | 1.71 | n/a | No Hit | |||
| GCR_HUMAN | 1.28 | 0.13 | 2.75 | n/a | No Hit | |||
| EP300_HUMAN | 0.74 | 0.64 | 1.70 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP asthma, body mass index (bmi), infant head circumference, microalbuminuria, spine bone mineral density (bmd), urinary albumin-to-creatinine ratio