rs181399 chr22:17742552 C>T
- Sequence
ctcaagcacctgatctaagacagg[C/T]gggaggcagaaggctgggtcagct
- ASB in cell types
- K562 (myelogenous leukemia) hepatocytes neural progenitors
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.33 | 1.11 | 1.67 | n/a | No Hit | |||
| RAD21_HUMAN | -1.25 | 1.48 | 1.44 | n/a | n/a | |||
| IKZF1_HUMAN | 1.45 | n/a | 1.00 | 2.61 | Discordant |
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Motif analysis
