rs1820962 chr7:84824420 T>C
- Sequence
cacccatcagctccatgacatttc[T/C]aagaacactcatatttggtgtaaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NR2C1_HUMAN COT1_HUMAN KDM1A_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | -2.63 | 3.02 | 1.50 | n/a | No Hit | |||
| COT1_HUMAN | -2.28 | 2.09 | 1.33 | n/a | No Hit | |||
| KDM1A_HUMAN | -1.28 | 1.57 | 1.33 | n/a | n/a | |||
| HDAC1_HUMAN | -0.83 | 1.75 | 1.39 | n/a | n/a | |||
| NCOR1_HUMAN | -0.87 | 1.47 | 1.42 | n/a | n/a |
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