Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs182420 chr19:47868938 C>T

Sequence
tgtgggtttttattgttgctactt[C/T]gagatgcagttgtatctctagaga
ASB in cell types
OCI-LY7 (diffuse large B-cell lymphoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.46 0.81 1.008.8·10-3 1.46 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

EMBL-EBI blood metabolite levels
GRASP breast cancer ldl cholesterol ldl cholesterol change with statins serum dehydroepiandrosterone sulphate (dheas) serum dehydroepiandrosterone sulphate (dheas) (females) total cholesterol total cholesterol change with statins triglycerides
GTEx eQTL Adrenal_Gland Liver Small_Intestine_Terminal_Ileum Stomach

Download