rs1824871 chr7:95772385 T>G
- Sequence
actgaggtctaagtcctaccgacg[T/G]tagagggatagacgaattgacctt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NR2C1_HUMAN COT1_HUMAN ID3_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | n/a | 2.83 | 1.50 | n/a | No Hit | |||
| COT1_HUMAN | -2.64 | 2.46 | 1.33 | n/a | No Hit | |||
| ID3_HUMAN | n/a | 2.86 | 1.50 | n/a | n/a | |||
| CTCF_HUMAN | 0.76 | 0.38 | 1.21 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Spleen, Thyroid