rs1832880 chr9:107541829 G>A
- Sequence
gggaggctggtaagatgacctcac[G/A]ggcagtttctgttgtggatttcac
- ASB in cell types
- GM12878 (female B-cells) LHSAR (prostate epithelial cells) breast tumor tissue
- ASB for transcription factors
- IKZF1_HUMAN ESR1_HUMAN ANDR_HUMAN BHE40_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.50 | 1.82 | 1.33 | n/a | No Hit | |||
| ESR1_HUMAN | 1.96 | n/a | 2.50 | n/a | No Hit | |||
| ANDR_HUMAN | -0.73 | 1.40 | 1.50 | n/a | No Hit | |||
| BHE40_HUMAN | 1.73 | -1.62 | 1.33 | -3.53 | Concordant |
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Motif analysis
