ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs184164
chr1:200895139
T
>
C
Sequence
tttggggctgagagcaggctggcc[T/C]gggagtggaggagcccaagcagtg
ASB in cell types
foreskin keratinocyte
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
-3.03
2.08
1.00
4.9·10
-3
2.33
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Prostate
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale