rs1845066 chr9:62802625 T>A
- Sequence
ggcctcccagagagtcccgccgtc[T/A]ccggcggccaggcctggctcagga
- ASB in cell types
- GM12878 (female B-cells) HepG2 (hepatoblastoma) MRC-iPS-25 (induced pluripotent stem cells) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GABP1_HUMAN CTCF_HUMAN JARD2_HUMAN PML_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABP1_HUMAN | 2.99 | n/a | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 1.79 | -1.00 | 1.54 | n/a | No Hit | |||
| JARD2_HUMAN | 2.78 | -3.45 | 1.33 | n/a | n/a | |||
| PML_HUMAN | 2.49 | n/a | 1.33 | n/a | n/a | |||
| KMT2A_HUMAN | 2.45 | n/a | 1.50 | n/a | n/a |
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Motif analysis
