rs1860429 chr12:3097691 T>C
- Sequence
agcaggacttagagcccagaggaa[T/C]ggctccccccgcaatccatgcctc
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) CD34+ bone marrow cell-derived erythroid progenitors
- ASB for transcription factors
- GATA1_HUMAN ZBT17_HUMAN ZN366_HUMAN GABPA_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | 2.64 | -3.06 | 1.50 | n/a | No Hit | |||
| ZBT17_HUMAN | 2.42 | n/a | 2.00 | n/a | No Hit | |||
| ZN366_HUMAN | 2.09 | n/a | 2.00 | n/a | n/a | |||
| GABPA_HUMAN | 1.15 | -0.96 | 1.42 | n/a | No Hit | |||
| NFIA_HUMAN | 1.21 | -0.58 | 1.33 | n/a | No Hit |
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