rs188300460 chr2:85754718 T>G
- Sequence
ccagcaccgccagcgcccccggag[T/G]ccactgtgcgccctgcgcccccga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -2.77 | 2.17 | 1.50 | 3.98 | Concordant |
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Motif analysis
