rs1884565 chr20:1896504 A>G
- Sequence
ttaagggagttgggagggagagaa[A/G]aatggggatcttgttttttgtcgt
- ASB in cell types
- HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.97 | -0.23 | 2.06 |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, hypertension (early onset hypertension), ldl cholesterol, microalbuminuria, premature ovarian failure, total cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Hippocampus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg