rs1886349 chr6:16320089 G>A
- Sequence
ggcatgttcaatgttggcaagtgg[G/A]tctgccttggctgcaaagggactg
- ASB in cell types
- HAEC (human aortic endothelial cells)
- ASB for transcription factors
- JUN_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.53 | 1.98 | 1.67 | n/a | No Hit | |||
| EP300_HUMAN | 0.09 | 0.82 | 1.39 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, birth weight, hdl cholesterol change with statins