Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs1887414 chr6:108971533 T>C

Sequence
acactaacacccatagtgccaaag[T/C]acacagtgaatgtacacaaatatt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GATA3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN 2.62 -2.86 1.3·10-61.00 1.33 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP asthma autism birth weight chronic kidney disease cystatin c in serum height ldl cholesterol maternal transmission distortion mitral annular calcium total cholesterol transmission distortion
GTEx eQTL Esophagus_Muscularis Lung Testis Thyroid

Download