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rs188914 chr17:27356651 A>C

Sequence
accactccctactgcctcacaacc[A/C]gtcagattcatatatttgctttgt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN MNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN -0.43 2.36 0.704.6·10-3 2.00 n/a n/a
MNT_HUMAN -0.45 1.59 1.000.03 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) bipolar disorder
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Testis Whole_Blood

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