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rs1892116 chr1:246917020 T>C

Sequence
cgcctattagtcatgtttggattt[T/C]accctgcctgcaatgtaaagtcat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN -3.51 1.91 1.000.01 2.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi)
GTEx eQTL Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Nerve_Tibial Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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