rs190472243 chr6:28729307 T>C
- Sequence
atatataagccaacagaactctca[T/C]gcggtcagggggtgtagctcagtg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN IKZF1_HUMAN COT1_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | -0.47 | 2.09 | 3.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.42 | 1.77 | 3.00 | n/a | No Hit | |||
| COT1_HUMAN | n/a | 1.99 | 3.00 | n/a | No Hit | |||
| MNT_HUMAN | n/a | 2.38 | 3.00 | n/a | n/a |
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