ADASTRA v1.6.10
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rs191777
chr7:92621060
T
>
A
Sequence
tgcacttaattccactatttggac[T/A]gctgaatataagccttaaaagttg
ASB in cell types
foreskin keratinocyte
GM12878 (female B-cells)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
n/a
0.59
1.00
3.2·10
-4
2.50
GM12878 (female B-cells)
0.32
0.63
0.39
0.02
1.28
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Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
height
,
infant head circumference
,
parkinsons disease
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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