rs193249552 chr3:23945138 G>A
- Sequence
aaggagaaggaaggggagaagggg[G/A]aagcgcaggagaaaagggtagccg
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN398_HUMAN ZN341_HUMAN KLF9_HUMAN PRDM9_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN398_HUMAN | 1.28 | n/a | 2.00 | n/a | n/a | |||
| ZN341_HUMAN | 2.51 | n/a | 2.00 | -4.03 | Concordant | |||
| KLF9_HUMAN | 2.06 | n/a | 1.50 | n/a | No Hit | |||
| PRDM9_HUMAN | 1.63 | -1.14 | 3.00 | n/a | n/a |
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Motif analysis
