rs193700 chr16:84511520 C>G
- Sequence
cggccaatgctgtcctgtgtccac[C/G]aggtggcgctcgcgatcaccgcaa
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) neutrophils tibial artery
- ASB for transcription factors
- PRD10_HUMAN NCOA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRD10_HUMAN | 2.24 | n/a | 2.00 | n/a | n/a | |||
| NCOA1_HUMAN | 1.81 | -3.38 | 2.75 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Liver, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis