rs193755 chr16:11233471 G>T
- Sequence
aggtcaccggcaaccccgggagcg[G/T]tggggcaggggctgctccgccagc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- NRF1_HUMAN NCOR1_HUMAN IKZF1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -2.64 | 2.04 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | -1.14 | 1.58 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.61 | 0.47 | 1.56 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.77 | 0.54 | 1.75 | n/a | n/a |
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