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rs1943973 chr18:49653146 G>A

Sequence
gtgcagctgcccccacgatctcct[G/A]cttctttggtttcagtttgctttg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PRDM1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM1_HUMAN 2.59 n/a 1.8·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI total cholesterol levels
GRASP 2 hour glucose hdl cholesterol ldl cholesterol obesity with early age of onset (age >2) total cholesterol
GTEx eQTL Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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