rs194517 chr7:90223449 A>G
- Sequence
cacaagagtgcctctacagtgtcc[A/G]cagggcaattataccttttacaga
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN ATF7_HUMAN ZN687_HUMAN ENL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.30 | -1.79 | 1.33 | n/a | No Hit | |||
| ATF7_HUMAN | 2.29 | n/a | 1.33 | n/a | n/a | |||
| ZN687_HUMAN | 2.34 | -2.38 | 1.33 | n/a | n/a | |||
| ENL_HUMAN | 2.05 | n/a | 1.33 | n/a | n/a | |||
| MTA2_HUMAN | 1.89 | -1.55 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, birth weight, fasting blood glucose, hdl cholesterol change with statins, years of education
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood