ADASTRA v1.6.10
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rs194868
chr7:104150021
T
>
C
Sequence
aggggatgagctgattatttatgt[T/C]gtaacaataggagttcatgtacca
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CEBPA_HUMAN
FOXP1_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPA_HUMAN
-2.04
1.83
1.00
0.02
1.50
n/a
No Hit
FOXP1_HUMAN
-0.91
1.48
1.00
0.04
1.42
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
childhood acute lymphoblastic leukemia
,
hdl cholesterol
,
salmonella-induced pyroptosis
,
waist hip ratio
GTEx eQTL
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)