rs1952 chr20:53944104 C>T
- Sequence
acaaggaccctatttgaaaaacaa[C/T]gcttattcattcctttttctatac
- ASB in cell types
- GM12878 (female B-cells)
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells) | 0.69 | 0.18 | 1.48 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), fasting blood glucose, infant head circumference, irritible bowel syndrome, ldl cholesterol, ldl cholesterol change with statins, mitral annular calcium, schizophrenia, tetrology of fallot, variant creutzfeldt-jakob disease