rs195420 chr6:37354031 C>G
- Sequence
gggcgggcgagcggagcctgcttt[C/G]gcagcgatcgcgagcgtgtggcga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NRF1_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 0.37 | 2.28 | 2.33 | 0.36 | Weak Concordant | |||
| HDAC1_HUMAN | n/a | 2.22 | 3.00 | n/a | n/a |
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Motif analysis
