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rs196101 chr22:38407251 G>A

Sequence
tcccaaagtgttaggattacaggc[G/A]tgagtcaccacacctggcccctgt
ASB in cell types
coronary artery smooth muscle
ASB for transcription factors
JUND_HUMAN JUN_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUND_HUMAN -1.97 1.79 1.000.01 1.33 0.05 Weak Concordant
JUN_HUMAN -1.49 1.57 1.000.03 1.33 0.91 Weak Concordant
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Motif analysis

JUND_HUMAN Weak Concordant
JUND_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Ovary Skin_Not_Sun_Exposed_Suprapubic Thyroid

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