rs196322 chr10:119668006 G>A
- Sequence
ggctccctgtcagggccatctcac[G/A]gcaggaattcagctctgaatgtga
- ASB in cell types
- HCT-116 (colon carcinoma) Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- MAX_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAX_HUMAN | -0.00 | 1.54 | 1.78 | n/a | No Hit | |||
| HTF4_HUMAN | -0.09 | 1.39 | 1.71 | 6.33 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
