ADASTRA v1.6.10
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adastra.autosome.org
rs196343
chr10:119658445
A
>
G
Sequence
agctgagtgctctcactctcgtgt[A/G]ccctgcctggctggcctgatgact
ASB in cell types
HCT-116 (colon carcinoma)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HCT-116 (colon carcinoma)
-0.29
1.00
0.81
1.4·10
-3
2.00
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5
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Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
cystatin c in serum
,
obesity with early age of onset (age >2)
,
total cholesterol change with statins
GTEx eQTL
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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