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rs196643 chr7:36312865 G>C

Sequence
taaatgcagaaaaacgtttgcagc[G/C]gagataaagagtgttgtgtgaacc
ASB in cell types
K562 (myelogenous leukemia) keratinocytes
ASB for transcription factors
SNAI2_HUMAN NR2C1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN n/a 2.26 1.008.6·10-4 1.50 n/a No Hit
NR2C1_HUMAN -1.37 1.46 1.000.04 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum ldl cholesterol change with statins
GTEx eQTL Skin_Sun_Exposed_Lower_leg

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