rs1967790 chr1:157367363 T>C
- Sequence
gcccccacatggcgtgtgacttgt[T/C]tcagctccccaaggcttaaggtgc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN REQU_HUMAN ELF1_HUMAN EHMT2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.28 | -0.86 | 1.78 | n/a | No Hit | |||
| REQU_HUMAN | 2.68 | n/a | 2.00 | n/a | n/a | |||
| ELF1_HUMAN | 1.92 | n/a | 1.67 | n/a | No Hit | |||
| EHMT2_HUMAN | 2.37 | n/a | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | 2.13 | n/a | 2.00 | n/a | n/a |
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