rs197354 chr7:36390460 A>G
- Sequence
agtgcggctgccgccgggaaaggc[A/G]gtaggatgtgtgatttgcggagtt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- MNT_HUMAN SMCA4_HUMAN NRF1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 2.03 | 2.16 | 2.12 | n/a | n/a | |||
| SMCA4_HUMAN | 2.35 | -0.93 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | 0.51 | 1.05 | 2.17 | n/a | No Hit | |||
| KDM1A_HUMAN | 2.09 | -2.76 | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | 1.23 | -2.59 | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 14