rs198383 chr1:11873583 G>A
- Sequence
tgctcatgacctatagaggcagtg[G/A]aggtctgctggtatttggtggttt
- ASB in cell types
- HepG2 (hepatoblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HepG2 (hepatoblastoma) | -0.16 | 0.95 | 1.39 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, cystatin c in serum, diastolic blood pressure (dbp), hdl cholesterol change with statins, ldl cholesterol, systolic blood pressure (sbp), total cholesterol change with statins
GTEx eQTL Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood