rs198783 chrX:38803851 T>C
- Sequence
tctgcaaccaaggcacgtgcattc[T/C]ggtcatcccacgcggggagcgcgc
- ASB in cell types
- GM12878 (female B-cells) HEK293T (embryonic kidney)
- ASB for transcription factors
- IKZF2_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -1.88 | 2.12 | 2.00 | n/a | n/a | |||
| ZFX_HUMAN | -3.72 | 2.23 | 2.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid